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Cited article:

APPINetwork: an R package for building and computational analysis of protein–protein interaction networks

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PeerJ 10 e14204 (2022)
https://doi.org/10.7717/peerj.14204

Proceedings of the International Conference on Computing and Communication Systems

Pooja Sharma and Dhruba Bhattacharyya
Lecture Notes in Networks and Systems, Proceedings of the International Conference on Computing and Communication Systems 24 801 (2018)
https://doi.org/10.1007/978-981-10-6890-4_76

Detecting protein complexes based on a combination of topological and biological properties in protein-protein interaction network

Pooja Sharma, D.K. Bhattacharyya and J.K. Kalita
Journal of Genetic Engineering and Biotechnology 16 (1) 217 (2018)
https://doi.org/10.1016/j.jgeb.2017.11.005

Development of an in silico method for the identification of subcomplexes involved in the biogenesis of multiprotein complexes in Saccharomyces cerevisiae

Annie Glatigny, Philippe Gambette, Alexa Bourand-Plantefol, Geneviève Dujardin and Marie-Hélène Mucchielli-Giorgi
BMC Systems Biology 11 (1) (2017)
https://doi.org/10.1186/s12918-017-0442-0

Protein complex finding and ranking: An application to Alzheimer’s disease

Pooja Sharma, Dhruba K Bhattacharyya and Jugal K Kalita
Journal of Biosciences 42 (3) 383 (2017)
https://doi.org/10.1007/s12038-017-9696-3

Unsupervised methods for finding protein complexes from PPI networks

Pooja Sharma, Hasin A. Ahmed, Swarup Roy and Dhruba K. Bhattacharyya
Network Modeling Analysis in Health Informatics and Bioinformatics 4 (1) (2015)
https://doi.org/10.1007/s13721-015-0080-7

Integromic Analysis of Genetic Variation and Gene Expression Identifies Networks for Cardiovascular Disease Phenotypes

Chen Yao, Brian H. Chen, Roby Joehanes, Burcak Otlu, Xiaoling Zhang, Chunyu Liu, Tianxiao Huan, Oznur Tastan, L. Adrienne Cupples, James B. Meigs, Caroline S. Fox, Jane E. Freedman, Paul Courchesne, Christopher J. O’Donnell, Peter J. Munson, Sunduz Keles and Daniel Levy
Circulation 131 (6) 536 (2015)
https://doi.org/10.1161/CIRCULATIONAHA.114.010696

Detecting protein complexes using connectivity among nodes in a PPI Network

Pooja Sharma, Hasin A Ahmed, Swarup Roy and Dhruba K Bhattacharyya
Network Modeling Analysis in Health Informatics and Bioinformatics 4 (1) (2015)
https://doi.org/10.1007/s13721-015-0107-0

Clust&See: A Cytoscape plugin for the identification, visualization and manipulation of network clusters

Lionel Spinelli, Philippe Gambette, Charles E. Chapple, et al.
Biosystems 113 (2) 91 (2013)
https://doi.org/10.1016/j.biosystems.2013.05.010